Welcome to my personal website
My name is Saber. I’m a PhD candidate in Bioinformatics program at University of British Columbia, Vancouver, Canada.
About
I am a PhD candidate in Bioinformatics program at University of British Columbia (UBC) and a research assistant at Dr. Inanc Birol's BTL lab at BC Cancer Genome Sciences Centre, Vancouver, Canada. I have a bachelor degree in Information Technology and a master degree in Medical Informatics. During my master studies I utilized data analysis approaches and machine learning algorithms to better understand the interaction between various cis-regulatory factors in different phases of RNA transcription. In my PhD, I developed a pipeline, called NanoSim which aims to characterize the next generation long-read sequencing technology, Oxford Nanopore. I am currently working on developing a machine learning pipeline for embedding nucleotide sequences to learn features of the transcriptome data implicitly.
Education & Work Experience
Education
B.S. in Information Technology Engineering, Azad University, Tabriz, IRAN, 2011
M.S. in Medical Informatics, Middle East Technical University, Ankara, TURKEY, 2015
Ph.D in Bioinformatics, University of British Columbia (UBC), Vancouver, CANADA, 2023 (expected)
Work Experience
Sep 2017 - Present: Research Assistant
BC Cancer Agency
Supervisor: Professor Inanc Birol
Sep 2013 - Aug 2017: Research Assistant
Middle East Technical University (METU)
Supervisor: Professor Hilal Kazan and Professor Yesim Aydin Son
Sep 2009 - Aug 2012: Network Manager
RaadHoushAfza (Rahavision) Co.