Welcome to my personal website

My name is Saber. I’m a PhD candidate in Bioinformatics program at University of British Columbia, Vancouver, Canada.

About

I am a PhD candidate in Bioinformatics program at University of British Columbia (UBC) and a research assistant at Dr. Inanc Birol's BTL lab at BC Cancer Genome Sciences Centre, Vancouver, Canada. I have a bachelor degree in Information Technology and a master degree in Medical Informatics. During my master studies I utilized data analysis approaches and machine learning algorithms to better understand the interaction between various cis-regulatory factors in different phases of RNA transcription. In my PhD, I developed a pipeline, called NanoSim which aims to characterize the next generation long-read sequencing technology, Oxford Nanopore. I am currently working on developing a machine learning pipeline for embedding nucleotide sequences to learn features of the transcriptome data implicitly.

Education & Work Experience

Education

  • B.S. in Information Technology Engineering, Azad University, Tabriz, IRAN, 2011

  • M.S. in Medical Informatics, Middle East Technical University, Ankara, TURKEY, 2015

  • Ph.D in Bioinformatics, University of British Columbia (UBC), Vancouver, CANADA, 2023 (expected)

Work Experience

  • Sep 2017 - Present: Research Assistant

    • BC Cancer Agency

    • Supervisor: Professor Inanc Birol

  • Sep 2013 - Aug 2017: Research Assistant

    • Middle East Technical University (METU)

    • Supervisor: Professor Hilal Kazan and Professor Yesim Aydin Son

  • Sep 2009 - Aug 2012: Network Manager

    • RaadHoushAfza (Rahavision) Co.